Package: grayleafspotr
Title: Quantitative Analysis of Gray Leaf Spot Colonies from Plate
        Images
Version: 0.99.2
Authors@R: person(
  given = "Rohan",
  family = "R",
  email = "phonics-tiffs1i@icloud.com",
  role = c("aut", "cre", "cph")
 )
Description: Quantitative phenotyping of gray leaf spot (Cercospora
        zeae-maydis) fungal colonies grown on petri dishes. The package
        segments colonies from time-lapse plate photographs using a
        bundled SmallUNet deep-learning model, extracts morphometric
        and texture features (area, eccentricity, crack coverage,
        radial profile), and provides tidy result objects together with
        template ggplot2 visualisations. Python dependencies are
        managed automatically through basilisk; no manual environment
        setup is required.
License: Apache License (>= 2.0) | file LICENSE
URL: https://rotsl.github.io/grayleafspotr,
        https://github.com/rotsl/grayleafspotr
BugReports: https://github.com/rotsl/grayleafspotr/issues
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
Depends: R (>= 4.1)
Imports: basilisk, reticulate, dplyr, ggplot2, jsonlite, readr, tibble,
        png
biocViews: Software, Preprocessing, Visualization, Classification,
        FeatureExtraction
Suggests: knitr, rmarkdown, pkgdown, magick, jpeg, tiff, testthat (>=
        3.0.0), shiny, bslib, bsicons, DT
Config/testthat/edition: 3
VignetteBuilder: knitr
Config/roxygen2/version: 8.0.0
Config/pak/sysreqs: libpng-dev python3 libx11-dev
Repository: https://rotsl.r-universe.dev
Date/Publication: 2026-06-08 23:55:24 UTC
RemoteUrl: https://github.com/rotsl/grayleafspotr
RemoteRef: HEAD
RemoteSha: 6a87fafd1c3440832e512ea536277003ab055cda
NeedsCompilation: no
Packaged: 2026-06-09 00:05:22 UTC; root
Author: Rohan R [aut, cre, cph]
Maintainer: Rohan R <phonics-tiffs1i@icloud.com>